Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM38O00635 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM38O00635 LINC01126-201ENST00000623515 1646 ntBASIC17.58■□□□□ 0.41
TRIM38O00635 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM38O00635 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM38O00635 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM38O00635 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM38O00635 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM38O00635 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRIM38O00635 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
TRIM38O00635 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM38O00635 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRIM38O00635 AD000864.1-201ENST00000624076 2295 ntBASIC17.58■□□□□ 0.4
TRIM38O00635 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 SCARNA2-201ENST00000458748 420 ntBASIC17.58■□□□□ 0.4
TRIM38O00635 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM38O00635 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM38O00635 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
TRIM38O00635 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM38O00635 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM38O00635 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRIM38O00635 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 AC141586.5-201ENST00000624546 2050 ntBASIC17.58■□□□□ 0.4
TRIM38O00635 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM38O00635 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM38O00635 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM38O00635 PP12613-201ENST00000424958 2230 ntBASIC17.57■□□□□ 0.4
TRIM38O00635 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM38O00635 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 AC125634.1-201ENST00000438758 1403 ntBASIC17.57■□□□□ 0.4
TRIM38O00635 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM38O00635 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM38O00635 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM38O00635 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM38O00635 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM38O00635 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM38O00635 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM38O00635 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM38O00635 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM38O00635 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 AC011467.2-201ENST00000598425 242 ntBASIC17.57■□□□□ 0.4
TRIM38O00635 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM38O00635 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM38O00635 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM38O00635 AC116407.3-201ENST00000623905 1129 ntBASIC17.57■□□□□ 0.4
TRIM38O00635 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM38O00635 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM38O00635 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM38O00635 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM38O00635 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM38O00635 AL096828.2-201ENST00000567259 1965 ntBASIC17.57■□□□□ 0.4
TRIM38O00635 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM38O00635 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM38O00635 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRIM38O00635 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM38O00635 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRIM38O00635 MIR940-201ENST00000401276 94 ntBASIC17.56■□□□□ 0.4
TRIM38O00635 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM38O00635 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM38O00635 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM38O00635 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM38O00635 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM38O00635 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 AC006116.8-202ENST00000587620 1550 ntBASIC17.56■□□□□ 0.4
TRIM38O00635 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM38O00635 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms