Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PIK3C2AO00443 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC23.13■■□□□ 1.29
PIK3C2AO00443 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
PIK3C2AO00443 AL354751.1-201ENST00000412768 1863 ntBASIC23.12■■□□□ 1.29
PIK3C2AO00443 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PIK3C2AO00443 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PIK3C2AO00443 SLC22A20-204ENST00000530038 1673 ntBASIC23.12■■□□□ 1.29
PIK3C2AO00443 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PIK3C2AO00443 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.12■■□□□ 1.29
PIK3C2AO00443 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC23.12■■□□□ 1.29
PIK3C2AO00443 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC23.12■■□□□ 1.29
PIK3C2AO00443 CNN2P2-201ENST00000443536 909 ntBASIC23.12■■□□□ 1.29
PIK3C2AO00443 CNN2P3-201ENST00000450201 906 ntBASIC23.12■■□□□ 1.29
PIK3C2AO00443 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PIK3C2AO00443 DUX4L27-201ENST00000554796 1261 ntBASIC23.12■■□□□ 1.29
PIK3C2AO00443 AL136317.3-201ENST00000618497 906 ntBASIC23.12■■□□□ 1.29
PIK3C2AO00443 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
PIK3C2AO00443 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PIK3C2AO00443 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC23.12■■□□□ 1.29
PIK3C2AO00443 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 WRB-204ENST00000398753 699 ntTSL 3 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 AL592309.1-201ENST00000443127 649 ntBASIC23.11■■□□□ 1.29
PIK3C2AO00443 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PIK3C2AO00443 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PIK3C2AO00443 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 SPCS2P4-201ENST00000436160 681 ntBASIC23.1■■□□□ 1.29
PIK3C2AO00443 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 FAM86C2P-203ENST00000528684 1004 ntBASIC23.1■■□□□ 1.29
PIK3C2AO00443 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 NME9-203ENST00000383180 2133 ntTSL 2 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PIK3C2AO00443 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PIK3C2AO00443 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 HLA-DRB6-201ENST00000411500 1235 ntBASIC23.09■■□□□ 1.29
PIK3C2AO00443 PMS2P4-201ENST00000412466 1052 ntBASIC23.09■■□□□ 1.29
PIK3C2AO00443 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PIK3C2AO00443 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 AC069262.1-201ENST00000539058 672 ntBASIC23.09■■□□□ 1.29
PIK3C2AO00443 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC23.09■■□□□ 1.29
PIK3C2AO00443 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PIK3C2AO00443 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
PIK3C2AO00443 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC23.08■■□□□ 1.29
PIK3C2AO00443 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PIK3C2AO00443 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PIK3C2AO00443 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PIK3C2AO00443 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC23.08■■□□□ 1.29
PIK3C2AO00443 MIR3909-201ENST00000579518 119 ntBASIC23.08■■□□□ 1.29
PIK3C2AO00443 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PIK3C2AO00443 AC084121.4-201ENST00000641598 221 ntBASIC23.08■■□□□ 1.29
PIK3C2AO00443 AF228730.8-201ENST00000642140 221 ntBASIC23.08■■□□□ 1.29
PIK3C2AO00443 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PIK3C2AO00443 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms