Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3B1O00203 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
AP3B1O00203 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3B1O00203 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
AP3B1O00203 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 KRT18P21-201ENST00000515767 1272 ntBASIC17.63■□□□□ 0.41
AP3B1O00203 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.63■□□□□ 0.41
AP3B1O00203 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.63■□□□□ 0.41
AP3B1O00203 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.63■□□□□ 0.41
AP3B1O00203 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.63■□□□□ 0.41
AP3B1O00203 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.63■□□□□ 0.41
AP3B1O00203 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.63■□□□□ 0.41
AP3B1O00203 AC116407.4-201ENST00000623319 1061 ntBASIC17.63■□□□□ 0.41
AP3B1O00203 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3B1O00203 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 AC016734.2-201ENST00000624325 1377 ntBASIC17.63■□□□□ 0.41
AP3B1O00203 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3B1O00203 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3B1O00203 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3B1O00203 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3B1O00203 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.63■□□□□ 0.41
AP3B1O00203 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.63■□□□□ 0.41
AP3B1O00203 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.62■□□□□ 0.41
AP3B1O00203 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
AP3B1O00203 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3B1O00203 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
AP3B1O00203 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3B1O00203 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.62■□□□□ 0.41
AP3B1O00203 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 AC003669.1-201ENST00000334569 611 ntBASIC17.62■□□□□ 0.41
AP3B1O00203 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.62■□□□□ 0.41
AP3B1O00203 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3B1O00203 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.62■□□□□ 0.41
AP3B1O00203 TSSC2-201ENST00000450217 709 ntBASIC17.62■□□□□ 0.41
AP3B1O00203 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.62■□□□□ 0.41
AP3B1O00203 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
AP3B1O00203 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.62■□□□□ 0.41
AP3B1O00203 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.62■□□□□ 0.41
AP3B1O00203 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
AP3B1O00203 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3B1O00203 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 KRT8P10-201ENST00000450021 1447 ntBASIC17.62■□□□□ 0.41
AP3B1O00203 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.62■□□□□ 0.41
AP3B1O00203 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3B1O00203 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3B1O00203 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
AP3B1O00203 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
AP3B1O00203 DRAXINP1-201ENST00000437611 948 ntBASIC17.61■□□□□ 0.41
AP3B1O00203 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 FAM210CP-201ENST00000445714 574 ntBASIC17.61■□□□□ 0.41
AP3B1O00203 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms