Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 AC016396.2-201ENST00000562575 1417 ntBASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC162PA2VCL2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 AL353593.2-201ENST00000602529 1483 ntBASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 AL513477.1-201ENST00000602865 2407 ntBASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 STK25P1-201ENST00000585406 838 ntBASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 AC114341.1-201ENST00000618070 349 ntBASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC162PA2VCL2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC162PA2VCL2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.46■□□□□ 0.38
CCDC162PA2VCL2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC162PA2VCL2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 AP001094.4-201ENST00000579008 2176 ntBASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 AC080080.1-201ENST00000625121 2420 ntBASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 POM121L3P-201ENST00000419331 1163 ntBASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 AD001527.2-201ENST00000622994 785 ntBASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC162PA2VCL2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC162PA2VCL2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms