Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHA3Q9Y5H8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHA3Q9Y5H8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 AL645929.1-201ENST00000420084 975 ntBASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 AL845331.1-201ENST00000424978 1190 ntBASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 TSPY22P-201ENST00000427496 604 ntBASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 AL671277.2-201ENST00000458060 996 ntBASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 AC005336.2-201ENST00000593183 939 ntBASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHA3Q9Y5H8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 LINC01023-201ENST00000606054 436 ntBASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 AC124864.1-201ENST00000623408 392 ntBASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 UBALD1-205ENST00000590891 2641 ntBASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHA3Q9Y5H8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 FLJ38576-201ENST00000623820 2459 ntBASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 AC103564.2-201ENST00000432853 1299 ntBASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 AC022616.7-201ENST00000525383 220 ntBASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 AL592071.1-201ENST00000611956 408 ntBASIC18.22■□□□□ 0.51
PCDHA3Q9Y5H8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms