Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC3AQ9Y2H6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 RCN1P2-201ENST00000398357 915 ntBASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 MIR1233-2-201ENST00000408138 82 ntBASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 MIR1233-1-201ENST00000408722 82 ntBASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 AC009949.1-201ENST00000623048 1830 ntBASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 KRT8P47-201ENST00000604727 1398 ntBASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
FNDC3AQ9Y2H6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 MIR940-201ENST00000401276 94 ntBASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 DUTP2-201ENST00000519164 463 ntBASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC3AQ9Y2H6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 RPL13AP23-201ENST00000480739 586 ntBASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 AC073648.2-201ENST00000510116 352 ntBASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC3AQ9Y2H6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms