Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 TP73-AS1-210ENST00000637775 1455 ntBASIC19.12■□□□□ 0.65
L1RE1Q9UN81 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 POM121L3P-201ENST00000419331 1163 ntBASIC19.12■□□□□ 0.65
L1RE1Q9UN81 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 RN7SL510P-201ENST00000581311 263 ntBASIC19.12■□□□□ 0.65
L1RE1Q9UN81 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.12■□□□□ 0.65
L1RE1Q9UN81 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 AC114341.1-201ENST00000618070 349 ntBASIC19.12■□□□□ 0.65
L1RE1Q9UN81 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
L1RE1Q9UN81 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 KRT16P4-201ENST00000453883 522 ntBASIC19.11■□□□□ 0.65
L1RE1Q9UN81 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 AL691432.3-201ENST00000621860 400 ntBASIC19.11■□□□□ 0.65
L1RE1Q9UN81 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.11■□□□□ 0.65
L1RE1Q9UN81 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 AC022898.2-201ENST00000616822 1312 ntBASIC19.1■□□□□ 0.65
L1RE1Q9UN81 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 RCN1P2-201ENST00000398357 915 ntBASIC19.1■□□□□ 0.65
L1RE1Q9UN81 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 PCDH8P1-201ENST00000428983 2773 ntBASIC19.1■□□□□ 0.65
L1RE1Q9UN81 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 AC100803.2-201ENST00000562459 1963 ntBASIC19.1■□□□□ 0.65
L1RE1Q9UN81 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
L1RE1Q9UN81 PCDHB19P-201ENST00000570871 2371 ntBASIC19.1■□□□□ 0.65
L1RE1Q9UN81 AL162727.3-201ENST00000635661 2787 ntBASIC19.1■□□□□ 0.65
L1RE1Q9UN81 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
L1RE1Q9UN81 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms