Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 MTDHP3-201ENST00000594186 672 ntBASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 AL355877.3-201ENST00000622820 899 ntBASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRDM9Q9NQV7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 PMPCAP1-201ENST00000508114 1576 ntBASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 AL121912.1-201ENST00000603683 238 ntBASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 KRT8P10-201ENST00000450021 1447 ntBASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PRDM9Q9NQV7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 AL121894.2-201ENST00000602977 491 ntBASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 AC073592.5-201ENST00000624854 528 ntBASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRDM9Q9NQV7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 AL023806.1-201ENST00000603994 1649 ntBASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms