Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AL590627.1-203ENST00000421194 1026 ntBASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AP000347.1-202ENST00000435868 847 ntBASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AC018712.1-201ENST00000455767 687 ntBASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AD001527.2-201ENST00000622994 785 ntBASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP1Q9H5V8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 PMPCAP1-201ENST00000508114 1576 ntBASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 FLJ13224-201ENST00000313737 1514 ntBASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 RPS2P28-201ENST00000314255 741 ntBASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 AL022342.1-201ENST00000400363 863 ntBASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 HNRNPDP1-201ENST00000439535 754 ntBASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 AC120114.3-201ENST00000611923 658 ntBASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 AL139288.1-201ENST00000623748 933 ntBASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP1Q9H5V8 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDCP1Q9H5V8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms