Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 SLC2A1-208ENST00000630287 2398 ntTSL 514.07□□□□□ -0.164e-7■■□□□ 12.7
CSTF2TQ9H0L4 SLC2A1-209ENST00000630821 591 ntTSL 213.46□□□□□ -0.254e-7■■□□□ 12.7
CSTF2TQ9H0L4 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.574e-7■■□□□ 12.7
CSTF2TQ9H0L4 RBCK1-214ENST00000621487 473 ntTSL 215.27■□□□□ 0.042e-11■■□□□ 12.6
CSTF2TQ9H0L4 TLK1-204ENST00000413010 603 ntTSL 516.04■□□□□ 0.161e-8■■□□□ 12.6
CSTF2TQ9H0L4 TLK1-203ENST00000409443 2783 ntTSL 215.54■□□□□ 0.081e-8■■□□□ 12.6
CSTF2TQ9H0L4 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.33□□□□□ -0.281e-8■■□□□ 12.6
CSTF2TQ9H0L4 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.411e-8■■□□□ 12.6
CSTF2TQ9H0L4 TLK1-201ENST00000359766 4321 ntTSL 510.44□□□□□ -0.741e-8■■□□□ 12.6
CSTF2TQ9H0L4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.31□□□□□ -1.721e-8■■□□□ 12.6
CSTF2TQ9H0L4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.011e-7■■□□□ 12.6
CSTF2TQ9H0L4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.131e-7■■□□□ 12.6
CSTF2TQ9H0L4 HDAC4-216ENST00000544989 342 ntTSL 511.09□□□□□ -0.631e-6■■□□□ 12.6
CSTF2TQ9H0L4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.142e-9■■□□□ 12.6
CSTF2TQ9H0L4 PPP2CB-207ENST00000520500 603 ntTSL 46.15□□□□□ -1.422e-9■■□□□ 12.6
CSTF2TQ9H0L4 PPP2CB-202ENST00000518243 577 ntTSL 35.21□□□□□ -1.582e-9■■□□□ 12.6
CSTF2TQ9H0L4 MEPCE-204ENST00000497759 666 ntTSL 319.69■□□□□ 0.743e-11■■□□□ 12.6
CSTF2TQ9H0L4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.7■□□□□ 0.263e-11■■□□□ 12.6
CSTF2TQ9H0L4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.233e-11■■□□□ 12.6
CSTF2TQ9H0L4 MEPCE-203ENST00000479201 592 ntTSL 214.04□□□□□ -0.163e-11■■□□□ 12.6
CSTF2TQ9H0L4 FAM102A-207ENST00000494606 536 ntTSL 313.68□□□□□ -0.222e-6■■□□□ 12.6
CSTF2TQ9H0L4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.841e-9■■□□□ 12.6
CSTF2TQ9H0L4 IL17RE-204ENST00000434065 2541 ntTSL 220.27■□□□□ 0.841e-9■■□□□ 12.6
CSTF2TQ9H0L4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.25■□□□□ 0.511e-9■■□□□ 12.6
CSTF2TQ9H0L4 IL17RE-202ENST00000383815 2808 ntTSL 217.28■□□□□ 0.361e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-208ENST00000538095 590 ntTSL 414.67□□□□□ -0.061e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-214ENST00000541365 870 ntTSL 314.37□□□□□ -0.111e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-212ENST00000540830 1936 ntTSL 1 (best)14.33□□□□□ -0.121e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-216ENST00000544522 851 ntTSL 214.08□□□□□ -0.161e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-204ENST00000535497 446 ntTSL 313.51□□□□□ -0.251e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-211ENST00000539855 1739 ntTSL 513.36□□□□□ -0.271e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC11.28□□□□□ -0.61e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC9.1□□□□□ -0.951e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.021e-9■■□□□ 12.6
CSTF2TQ9H0L4 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.351e-9■■□□□ 12.6
CSTF2TQ9H0L4 SMAD5-208ENST00000513418 523 ntTSL 54.46□□□□□ -1.71e-9■■□□□ 12.6
CSTF2TQ9H0L4 PCSK6-210ENST00000559499 3325 ntTSL 213.67□□□□□ -0.221e-6■■□□□ 12.6
CSTF2TQ9H0L4 PCSK6-209ENST00000559430 338 ntTSL 312.53□□□□□ -0.41e-6■■□□□ 12.6
CSTF2TQ9H0L4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.5■□□□□ 0.231e-6■■□□□ 12.6
CSTF2TQ9H0L4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.211e-6■■□□□ 12.6
CSTF2TQ9H0L4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.12□□□□□ -0.311e-6■■□□□ 12.6
CSTF2TQ9H0L4 MALAT1-202ENST00000534336 8708 ntBASIC9.03□□□□□ -0.961e-323■■□□□ 12.6
CSTF2TQ9H0L4 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC7.22□□□□□ -1.251e-323■■□□□ 12.6
CSTF2TQ9H0L4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.172e-6■■□□□ 12.6
CSTF2TQ9H0L4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.222e-6■■□□□ 12.6
CSTF2TQ9H0L4 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.21□□□□□ -0.452e-6■■□□□ 12.6
CSTF2TQ9H0L4 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.482e-6■■□□□ 12.6
CSTF2TQ9H0L4 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.492e-6■■□□□ 12.6
CSTF2TQ9H0L4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.212e-6■■□□□ 12.6
CSTF2TQ9H0L4 RPL15-210ENST00000456530 2835 ntTSL 1 (best) BASIC10.23□□□□□ -0.772e-6■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-215ENST00000530093 414 ntTSL 421.81■■□□□ 1.084e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-209ENST00000527199 540 ntTSL 320.85■□□□□ 0.934e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-210ENST00000527807 814 ntTSL 520.85■□□□□ 0.934e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-213ENST00000529346 1718 ntTSL 220.4■□□□□ 0.864e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-224ENST00000533500 587 ntTSL 319.91■□□□□ 0.784e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-229ENST00000534755 474 ntTSL 419.71■□□□□ 0.754e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-203ENST00000524763 580 ntTSL 317.93■□□□□ 0.464e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.014e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 04e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.064e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-214ENST00000529680 551 ntTSL 414.27□□□□□ -0.134e-8■■□□□ 12.6
CSTF2TQ9H0L4 EPS8L2-208ENST00000526909 3844 ntTSL 511.78□□□□□ -0.524e-8■■□□□ 12.6
CSTF2TQ9H0L4 KMT5A-209ENST00000537270 352 ntTSL 516.38■□□□□ 0.218e-7■■□□□ 12.6
CSTF2TQ9H0L4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.14■□□□□ 0.972e-7■■□□□ 12.6
CSTF2TQ9H0L4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.69■■□□□ 1.72e-9■■□□□ 12.6
CSTF2TQ9H0L4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.53■□□□□ 0.562e-9■■□□□ 12.6
CSTF2TQ9H0L4 KCTD21-203ENST00000526208 726 ntTSL 418.49■□□□□ 0.552e-9■■□□□ 12.6
CSTF2TQ9H0L4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.42e-9■■□□□ 12.6
CSTF2TQ9H0L4 KCTD21-205ENST00000529350 558 ntTSL 417.28■□□□□ 0.362e-9■■□□□ 12.6
CSTF2TQ9H0L4 KCTD21-206ENST00000530018 559 ntTSL 411.44□□□□□ -0.582e-9■■□□□ 12.6
CSTF2TQ9H0L4 KCTD21-201ENST00000340067 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.862e-9■■□□□ 12.6
CSTF2TQ9H0L4 GRK2-209ENST00000530291 324 ntTSL 28.68□□□□□ -1.022e-9■■□□□ 12.6
CSTF2TQ9H0L4 KCTD21-204ENST00000528776 538 ntTSL 48.06□□□□□ -1.122e-9■■□□□ 12.6
CSTF2TQ9H0L4 LCAT-208ENST00000575467 842 ntTSL 518.05■□□□□ 0.481e-6■■□□□ 12.5
CSTF2TQ9H0L4 LCAT-204ENST00000570980 1240 ntTSL 217.76■□□□□ 0.431e-6■■□□□ 12.5
CSTF2TQ9H0L4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.231e-6■■□□□ 12.5
CSTF2TQ9H0L4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.021e-6■■□□□ 12.5
CSTF2TQ9H0L4 EIF4G2-218ENST00000531416 1969 ntTSL 214.41□□□□□ -0.15e-10■■□□□ 12.5
CSTF2TQ9H0L4 EIF4G2-225ENST00000532383 6769 ntTSL 1 (best)9.24□□□□□ -0.935e-10■■□□□ 12.5
CSTF2TQ9H0L4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.35e-10■■□□□ 12.5
CSTF2TQ9H0L4 FAM214A-206ENST00000561543 931 ntTSL 323.56■■□□□ 1.362e-9■■□□□ 12.5
CSTF2TQ9H0L4 FAM214A-205ENST00000561490 547 ntTSL 41.92□□□□□ -2.12e-9■■□□□ 12.5
CSTF2TQ9H0L4 FAM214A-209ENST00000566768 576 ntTSL 31.2□□□□□ -2.222e-9■■□□□ 12.5
CSTF2TQ9H0L4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.77■□□□□ 0.289e-7■■□□□ 12.5
CSTF2TQ9H0L4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.139e-7■■□□□ 12.5
CSTF2TQ9H0L4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.065e-9■■□□□ 12.5
CSTF2TQ9H0L4 GIPR-207ENST00000591322 557 ntTSL 415.48■□□□□ 0.071e-9■■□□□ 12.5
CSTF2TQ9H0L4 MZF1-AS1-203ENST00000600726 559 ntTSL 412.86□□□□□ -0.359e-7■■□□□ 12.5
CSTF2TQ9H0L4 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.31□□□□□ -0.449e-7■■□□□ 12.5
CSTF2TQ9H0L4 MZF1-AS1-201ENST00000593642 565 ntTSL 310.02□□□□□ -0.819e-7■■□□□ 12.5
CSTF2TQ9H0L4 AMFR-211ENST00000568657 539 ntTSL 421.38■■□□□ 1.014e-7■■□□□ 12.5
CSTF2TQ9H0L4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.078e-9■■□□□ 12.5
CSTF2TQ9H0L4 SLC27A1-209ENST00000600297 1163 ntTSL 221.62■■□□□ 1.052e-6■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.03■□□□□ 0.962e-12■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.03■□□□□ 0.962e-12■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.872e-12■■□□□ 12.5
CSTF2TQ9H0L4 SLC27A1-208ENST00000600277 1423 ntTSL 220.32■□□□□ 0.842e-6■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.562e-12■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-209ENST00000494411 600 ntTSL 417.84■□□□□ 0.452e-12■■□□□ 12.5
CSTF2TQ9H0L4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.69■□□□□ 0.422e-6■■□□□ 12.5
Retrieved 100 of 19,151 protein–RNA pairs in 243.8 ms