Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 AL024508.2-201ENST00000607749 1894 ntBASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 RNF216P1-203ENST00000404404 2427 ntBASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 SLC29A4P1-201ENST00000398760 971 ntBASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 MIR4758-201ENST00000577688 71 ntBASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 MIR600HG-201ENST00000449175 5984 ntBASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM3Q9BZL3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 AC036111.1-201ENST00000533973 1582 ntBASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM3Q9BZL3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms