Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
FOXRED1Q96CU9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FOXRED1Q96CU9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
FOXRED1Q96CU9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.23■□□□□ 0.03
FOXRED1Q96CU9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 RCN1P1-201ENST00000400413 996 ntBASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 KRT18P21-201ENST00000515767 1272 ntBASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AC009154.2-201ENST00000621177 724 ntBASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AL157888.1-201ENST00000631930 593 ntBASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AL031432.5-201ENST00000641059 760 ntBASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 AC116353.5-201ENST00000638148 1699 ntBASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXRED1Q96CU9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 AC008894.3-201ENST00000624324 3103 ntBASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 KRT18P57-201ENST00000443599 1254 ntBASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 AC034232.1-201ENST00000506026 1064 ntBASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 AC010203.1-204ENST00000548782 407 ntBASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXRED1Q96CU9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXRED1Q96CU9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms