Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 OR7E14P-202ENST00000530490 1290 ntBASIC17.34■□□□□ 0.37
SCAMP4Q969E2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 AP001005.1-201ENST00000571755 1248 ntBASIC17.34■□□□□ 0.37
SCAMP4Q969E2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCAMP4Q969E2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SCAMP4Q969E2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 AC012640.2-201ENST00000561606 901 ntBASIC17.32■□□□□ 0.36
SCAMP4Q969E2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.32■□□□□ 0.36
SCAMP4Q969E2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 MIR7706-201ENST00000613747 67 ntBASIC17.32■□□□□ 0.36
SCAMP4Q969E2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 AC107918.4-202ENST00000641623 219 ntBASIC17.32■□□□□ 0.36
SCAMP4Q969E2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 LINC00896-202ENST00000609602 2128 ntBASIC17.32■□□□□ 0.36
SCAMP4Q969E2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SCAMP4Q969E2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 AC097637.2-201ENST00000624096 1997 ntBASIC17.31■□□□□ 0.36
SCAMP4Q969E2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCAMP4Q969E2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms