Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMARCC1Q92922 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMARCC1Q92922 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.17■■□□□ 1.14
SMARCC1Q92922 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.17■■□□□ 1.14
SMARCC1Q92922 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SMARCC1Q92922 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.17■■□□□ 1.14
SMARCC1Q92922 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMARCC1Q92922 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMARCC1Q92922 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 AC063926.2-201ENST00000623766 1308 ntBASIC22.16■■□□□ 1.14
SMARCC1Q92922 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 VMA21-202ENST00000370361 693 ntTSL 5 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 KLF2P3-201ENST00000451977 1087 ntBASIC22.16■■□□□ 1.14
SMARCC1Q92922 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 AC107918.2-201ENST00000530817 355 ntBASIC22.16■■□□□ 1.14
SMARCC1Q92922 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 AL135744.1-201ENST00000565098 629 ntBASIC22.16■■□□□ 1.14
SMARCC1Q92922 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 AL035252.4-201ENST00000624174 288 ntBASIC22.16■■□□□ 1.14
SMARCC1Q92922 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SMARCC1Q92922 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMARCC1Q92922 KRT18P55-202ENST00000578578 1546 ntBASIC22.16■■□□□ 1.14
SMARCC1Q92922 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 MIR943-201ENST00000401286 94 ntBASIC22.15■■□□□ 1.14
SMARCC1Q92922 AC005034.1-201ENST00000426657 489 ntBASIC22.15■■□□□ 1.14
SMARCC1Q92922 GPS2P2-201ENST00000430745 888 ntBASIC22.15■■□□□ 1.14
SMARCC1Q92922 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 TERF1P3-201ENST00000505638 1227 ntBASIC22.15■■□□□ 1.14
SMARCC1Q92922 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 MIR4515-201ENST00000584082 81 ntBASIC22.15■■□□□ 1.14
SMARCC1Q92922 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMARCC1Q92922 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
SMARCC1Q92922 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.14■■□□□ 1.14
SMARCC1Q92922 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMARCC1Q92922 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMARCC1Q92922 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC1Q92922 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC1Q92922 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 AC002472.2-201ENST00000442739 958 ntBASIC22.14■■□□□ 1.13
SMARCC1Q92922 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 POLD4-211ENST00000539074 714 ntTSL 3 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 AL161645.1-201ENST00000622716 1255 ntBASIC22.14■■□□□ 1.13
SMARCC1Q92922 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC1Q92922 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC1Q92922 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.14■■□□□ 1.13
SMARCC1Q92922 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMARCC1Q92922 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC1Q92922 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC1Q92922 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC1Q92922 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC1Q92922 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 AC236430.1-201ENST00000402231 743 ntBASIC22.13■■□□□ 1.13
SMARCC1Q92922 AC107890.1-201ENST00000422478 521 ntBASIC22.13■■□□□ 1.13
SMARCC1Q92922 TSPY16P-201ENST00000449843 468 ntBASIC22.13■■□□□ 1.13
SMARCC1Q92922 INO80E-210ENST00000567705 880 ntTSL 3 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC1Q92922 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC1Q92922 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms