Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEDD1Q8NHV4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NEDD1Q8NHV4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NEDD1Q8NHV4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 VN2R19P-201ENST00000442399 1052 ntBASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NEDD1Q8NHV4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NEDD1Q8NHV4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NEDD1Q8NHV4 AC068880.1-201ENST00000507289 2297 ntBASIC20.27■□□□□ 0.83
NEDD1Q8NHV4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
NEDD1Q8NHV4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 KRT18P2-201ENST00000447938 1258 ntBASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 AC064836.3-201ENST00000607928 673 ntBASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.26■□□□□ 0.83
NEDD1Q8NHV4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 CRYGEP-201ENST00000412192 528 ntBASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 HCG4B-203ENST00000450128 991 ntBASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 OR7E47P-204ENST00000575924 449 ntBASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 AL138688.1-201ENST00000624851 1594 ntBASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NEDD1Q8NHV4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 PI4KAP1-204ENST00000612579 1703 ntBASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 MRPL20P1-201ENST00000400819 433 ntBASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 PAWRP1-201ENST00000451083 565 ntBASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 RNA5SP416-201ENST00000516838 111 ntBASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 MIR4751-201ENST00000578027 74 ntBASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 AC018470.1-201ENST00000624790 3129 ntBASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms