Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 MIR662-201ENST00000384847 95 ntBASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CFAP61Q8NHU2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 AL645929.1-201ENST00000420084 975 ntBASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CFAP61Q8NHU2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 RNF126P1-202ENST00000569893 925 ntBASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 AC004263.2-201ENST00000617183 678 ntBASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CFAP61Q8NHU2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 AL513477.1-201ENST00000602865 2407 ntBASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CFAP61Q8NHU2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms