Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 INGX-202ENST00000489074 768 ntBASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 AL135744.1-201ENST00000565098 629 ntBASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 AL139327.4-201ENST00000612362 153 ntBASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KLHDC9Q8NEP7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 KRT18P32-201ENST00000424695 1287 ntBASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 DUX4L17-201ENST00000557360 1267 ntBASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 RARRES2P8-201ENST00000566335 367 ntBASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 AF228730.6-201ENST00000641497 218 ntBASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 AC084121.3-201ENST00000641716 218 ntBASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 AC105233.6-201ENST00000642093 218 ntBASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
KLHDC9Q8NEP7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 TUBB3P1-201ENST00000405796 1332 ntBASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 LINC01225-203ENST00000563550 1244 ntBASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KLHDC9Q8NEP7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHDC9Q8NEP7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 AC015922.1-201ENST00000421102 1152 ntBASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 BASP1P1-201ENST00000430708 665 ntBASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 SPCS2P4-201ENST00000436160 681 ntBASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.08■□□□□ 0.64
KLHDC9Q8NEP7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms