Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 AC243591.1-201ENST00000452967 1364 ntBASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 PMS2P1-201ENST00000431037 1228 ntBASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 AC093909.1-201ENST00000504731 1122 ntBASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC33Q8N5R6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 PKD1P1-201ENST00000458669 6805 ntBASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 AL355877.3-201ENST00000622820 899 ntBASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 AC139713.2-201ENST00000641328 2723 ntBASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC33Q8N5R6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC33Q8N5R6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 FGFR3P6-201ENST00000457012 610 ntBASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 AC073648.2-201ENST00000510116 352 ntBASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 AP001269.4-201ENST00000609611 512 ntBASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC33Q8N5R6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms