Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 AC243591.1-201ENST00000452967 1364 ntBASIC18.1■□□□□ 0.49
SCML4Q8N228 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.1■□□□□ 0.49
SCML4Q8N228 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.1■□□□□ 0.49
SCML4Q8N228 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.1■□□□□ 0.49
SCML4Q8N228 IGHV3-22-201ENST00000520721 359 ntBASIC18.1■□□□□ 0.49
SCML4Q8N228 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.1■□□□□ 0.49
SCML4Q8N228 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SCML4Q8N228 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.1■□□□□ 0.49
SCML4Q8N228 AL356488.2-201ENST00000602755 427 ntBASIC18.1■□□□□ 0.49
SCML4Q8N228 AC116407.3-201ENST00000623905 1129 ntBASIC18.1■□□□□ 0.49
SCML4Q8N228 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCML4Q8N228 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.1■□□□□ 0.49
SCML4Q8N228 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SCML4Q8N228 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 AC006504.4-201ENST00000592118 1568 ntBASIC18.09■□□□□ 0.49
SCML4Q8N228 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SCML4Q8N228 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SCML4Q8N228 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 ELK2BP-201ENST00000415014 1224 ntBASIC18.09■□□□□ 0.49
SCML4Q8N228 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.09■□□□□ 0.49
SCML4Q8N228 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.09■□□□□ 0.49
SCML4Q8N228 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.09■□□□□ 0.49
SCML4Q8N228 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.09■□□□□ 0.49
SCML4Q8N228 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SCML4Q8N228 BX640515.1-201ENST00000617215 977 ntBASIC18.09■□□□□ 0.49
SCML4Q8N228 MIR1199-201ENST00000621445 119 ntBASIC18.09■□□□□ 0.49
SCML4Q8N228 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.09■□□□□ 0.49
SCML4Q8N228 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SCML4Q8N228 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCML4Q8N228 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.09■□□□□ 0.49
SCML4Q8N228 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCML4Q8N228 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SCML4Q8N228 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SCML4Q8N228 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
SCML4Q8N228 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCML4Q8N228 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SCML4Q8N228 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SCML4Q8N228 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.08■□□□□ 0.48
SCML4Q8N228 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.08■□□□□ 0.48
SCML4Q8N228 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.08■□□□□ 0.48
SCML4Q8N228 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.08■□□□□ 0.48
SCML4Q8N228 AP002414.1-201ENST00000391405 1147 ntBASIC18.08■□□□□ 0.48
SCML4Q8N228 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.08■□□□□ 0.48
SCML4Q8N228 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.08■□□□□ 0.48
SCML4Q8N228 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.08■□□□□ 0.48
SCML4Q8N228 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.08■□□□□ 0.48
SCML4Q8N228 TERC-201ENST00000602385 541 ntBASIC18.08■□□□□ 0.48
SCML4Q8N228 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SCML4Q8N228 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.08■□□□□ 0.48
SCML4Q8N228 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.08■□□□□ 0.48
SCML4Q8N228 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCML4Q8N228 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.08■□□□□ 0.48
SCML4Q8N228 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 AP002414.3-201ENST00000589352 1468 ntBASIC18.07■□□□□ 0.48
SCML4Q8N228 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.07■□□□□ 0.48
SCML4Q8N228 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SCML4Q8N228 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.07■□□□□ 0.48
SCML4Q8N228 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.07■□□□□ 0.48
SCML4Q8N228 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SCML4Q8N228 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.07■□□□□ 0.48
SCML4Q8N228 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCML4Q8N228 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms