Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 TNRC18P3-201ENST00000441896 2691 ntBASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPNE8Q86YQ8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 AC105020.1-201ENST00000435356 2205 ntBASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 AC092068.3-201ENST00000587894 2016 ntBASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 LINC02012-201ENST00000608206 1725 ntBASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 PCED1CP-201ENST00000419887 785 ntBASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 BX276092.5-203ENST00000456199 560 ntBASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 TPSP2-201ENST00000561760 610 ntBASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPNE8Q86YQ8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.51
CPNE8Q86YQ8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 AC122714.2-201ENST00000502787 707 ntBASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 AL121672.3-201ENST00000608644 468 ntBASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 AC092171.3-201ENST00000610122 2651 ntBASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 AC079328.2-201ENST00000561241 3354 ntBASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 AC233702.3-201ENST00000578656 1387 ntBASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CPNE8Q86YQ8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms