Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HIST1H3AP68431 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H3AP68431 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H3AP68431 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HIST1H3AP68431 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HIST1H3AP68431 POM121L3P-201ENST00000419331 1163 ntBASIC15.27■□□□□ 0.04
HIST1H3AP68431 LINC00265-3P-201ENST00000447588 903 ntBASIC15.27■□□□□ 0.04
HIST1H3AP68431 MINOS1P3-201ENST00000457048 203 ntBASIC15.27■□□□□ 0.04
HIST1H3AP68431 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.27■□□□□ 0.04
HIST1H3AP68431 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.27■□□□□ 0.04
HIST1H3AP68431 AC092329.2-201ENST00000598402 547 ntBASIC15.27■□□□□ 0.04
HIST1H3AP68431 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HIST1H3AP68431 AC010331.1-201ENST00000611423 582 ntBASIC15.27■□□□□ 0.04
HIST1H3AP68431 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST1H3AP68431 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.27■□□□□ 0.03
HIST1H3AP68431 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HIST1H3AP68431 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.27■□□□□ 0.03
HIST1H3AP68431 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
HIST1H3AP68431 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
HIST1H3AP68431 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HIST1H3AP68431 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.03
HIST1H3AP68431 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 ARMC10P1-201ENST00000313754 855 ntBASIC15.26■□□□□ 0.03
HIST1H3AP68431 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 RCN1P2-201ENST00000398357 915 ntBASIC15.26■□□□□ 0.03
HIST1H3AP68431 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 AC012615.1-201ENST00000565797 1299 ntBASIC15.26■□□□□ 0.03
HIST1H3AP68431 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 AC132938.5-201ENST00000624980 1813 ntBASIC15.26■□□□□ 0.03
HIST1H3AP68431 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIST1H3AP68431 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIST1H3AP68431 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 PRORSD1P-202ENST00000563365 2154 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
HIST1H3AP68431 AC009336.1-201ENST00000608941 1553 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 AC003669.1-201ENST00000334569 611 ntBASIC15.25■□□□□ 0.03
HIST1H3AP68431 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIST1H3AP68431 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms