Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NCF1C-201ENST00000438382 1427 ntBASIC18.14■□□□□ 0.49
SCNN1AP37088 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.13■□□□□ 0.49
SCNN1AP37088 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 LINC00982-205ENST00000420957 435 ntBASIC18.13■□□□□ 0.49
SCNN1AP37088 FAAHP1-202ENST00000446499 1238 ntBASIC18.13■□□□□ 0.49
SCNN1AP37088 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.13■□□□□ 0.49
SCNN1AP37088 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCNN1AP37088 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.13■□□□□ 0.49
SCNN1AP37088 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.13■□□□□ 0.49
SCNN1AP37088 AL353135.1-201ENST00000606729 504 ntBASIC18.13■□□□□ 0.49
SCNN1AP37088 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCNN1AP37088 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 AC097637.2-201ENST00000624096 1997 ntBASIC18.13■□□□□ 0.49
SCNN1AP37088 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.13■□□□□ 0.49
SCNN1AP37088 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCNN1AP37088 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCNN1AP37088 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
SCNN1AP37088 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SCNN1AP37088 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.13■□□□□ 0.49
SCNN1AP37088 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.12■□□□□ 0.49
SCNN1AP37088 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.12■□□□□ 0.49
SCNN1AP37088 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.12■□□□□ 0.49
SCNN1AP37088 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.12■□□□□ 0.49
SCNN1AP37088 AC124947.2-201ENST00000547118 1133 ntBASIC18.12■□□□□ 0.49
SCNN1AP37088 KRT126P-201ENST00000549467 1181 ntBASIC18.12■□□□□ 0.49
SCNN1AP37088 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SCNN1AP37088 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SCNN1AP37088 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SCNN1AP37088 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.12■□□□□ 0.49
SCNN1AP37088 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.12■□□□□ 0.49
SCNN1AP37088 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCNN1AP37088 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SCNN1AP37088 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.12■□□□□ 0.49
SCNN1AP37088 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SCNN1AP37088 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SCNN1AP37088 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SCNN1AP37088 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.11■□□□□ 0.49
SCNN1AP37088 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SCNN1AP37088 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SCNN1AP37088 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.11■□□□□ 0.49
SCNN1AP37088 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SCNN1AP37088 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.11■□□□□ 0.49
SCNN1AP37088 AL121912.1-201ENST00000603683 238 ntBASIC18.11■□□□□ 0.49
SCNN1AP37088 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.11■□□□□ 0.49
SCNN1AP37088 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
SCNN1AP37088 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.11■□□□□ 0.49
SCNN1AP37088 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCNN1AP37088 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCNN1AP37088 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCNN1AP37088 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms