Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC107890.1-201ENST00000422478 521 ntBASIC21.37■■□□□ 1.01
PDE6BP35913 GPS2P2-201ENST00000430745 888 ntBASIC21.37■■□□□ 1.01
PDE6BP35913 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PDE6BP35913 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.37■■□□□ 1.01
PDE6BP35913 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.37■■□□□ 1.01
PDE6BP35913 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.37■■□□□ 1.01
PDE6BP35913 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.37■■□□□ 1.01
PDE6BP35913 AC012645.4-201ENST00000610691 1061 ntBASIC21.37■■□□□ 1.01
PDE6BP35913 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.37■■□□□ 1.01
PDE6BP35913 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
PDE6BP35913 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.36■■□□□ 1.01
PDE6BP35913 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.36■■□□□ 1.01
PDE6BP35913 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.36■■□□□ 1.01
PDE6BP35913 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PDE6BP35913 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PDE6BP35913 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.36■■□□□ 1.01
PDE6BP35913 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.36■■□□□ 1.01
PDE6BP35913 AC005225.4-201ENST00000557330 545 ntBASIC21.36■■□□□ 1.01
PDE6BP35913 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.36■■□□□ 1.01
PDE6BP35913 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDE6BP35913 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PDE6BP35913 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PDE6BP35913 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDE6BP35913 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.35■■□□□ 1.01
PDE6BP35913 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 AC135776.1-201ENST00000319817 2481 ntBASIC21.35■■□□□ 1.01
PDE6BP35913 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PDE6BP35913 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.35■■□□□ 1.01
PDE6BP35913 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.35■■□□□ 1.01
PDE6BP35913 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.35■■□□□ 1.01
PDE6BP35913 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.35■■□□□ 1.01
PDE6BP35913 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.35■■□□□ 1.01
PDE6BP35913 RBPMS2P1-201ENST00000437762 623 ntBASIC21.35■■□□□ 1.01
PDE6BP35913 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.35■■□□□ 1.01
PDE6BP35913 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.35■■□□□ 1.01
PDE6BP35913 AL161645.1-201ENST00000622716 1255 ntBASIC21.35■■□□□ 1.01
PDE6BP35913 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.35■■□□□ 1.01
PDE6BP35913 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PDE6BP35913 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDE6BP35913 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.35■■□□□ 1.01
PDE6BP35913 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PDE6BP35913 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PDE6BP35913 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PDE6BP35913 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PDE6BP35913 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.34■■□□□ 1.01
PDE6BP35913 AC125807.1-201ENST00000483097 614 ntBASIC21.34■■□□□ 1.01
PDE6BP35913 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.34■■□□□ 1.01
PDE6BP35913 AC107918.2-201ENST00000530817 355 ntBASIC21.34■■□□□ 1.01
PDE6BP35913 DUX4L17-201ENST00000557360 1267 ntBASIC21.34■■□□□ 1.01
PDE6BP35913 AC140878.1-201ENST00000565277 250 ntBASIC21.34■■□□□ 1.01
PDE6BP35913 MIR4515-201ENST00000584082 81 ntBASIC21.34■■□□□ 1.01
PDE6BP35913 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.34■■□□□ 1.01
PDE6BP35913 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.34■■□□□ 1.01
PDE6BP35913 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PDE6BP35913 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms