Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SOX11P35716 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX11P35716 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.13■□□□□ 0.33
SOX11P35716 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX11P35716 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SOX11P35716 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SOX11P35716 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX11P35716 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX11P35716 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SOX11P35716 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SOX11P35716 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SOX11P35716 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SOX11P35716 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX11P35716 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
SOX11P35716 MIR3180-1-201ENST00000580374 94 ntBASIC17.12■□□□□ 0.33
SOX11P35716 MIR3180-3-201ENST00000584616 94 ntBASIC17.12■□□□□ 0.33
SOX11P35716 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX11P35716 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX11P35716 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.12■□□□□ 0.33
SOX11P35716 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SOX11P35716 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX11P35716 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.11■□□□□ 0.33
SOX11P35716 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 CROCCP2-202ENST00000412962 2773 ntBASIC17.11■□□□□ 0.33
SOX11P35716 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.11■□□□□ 0.33
SOX11P35716 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SOX11P35716 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 AL023806.1-201ENST00000603994 1649 ntBASIC17.11■□□□□ 0.33
SOX11P35716 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SOX11P35716 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SOX11P35716 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SOX11P35716 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 KRT8P26-201ENST00000534154 1276 ntBASIC17.11■□□□□ 0.33
SOX11P35716 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.11■□□□□ 0.33
SOX11P35716 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 AL121894.2-201ENST00000602977 491 ntBASIC17.11■□□□□ 0.33
SOX11P35716 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SOX11P35716 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SOX11P35716 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SOX11P35716 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 AC100803.2-201ENST00000562459 1963 ntBASIC17.11■□□□□ 0.33
SOX11P35716 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SOX11P35716 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.11■□□□□ 0.33
SOX11P35716 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SOX11P35716 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX11P35716 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 AC093010.1-201ENST00000473625 1624 ntBASIC17.1■□□□□ 0.33
SOX11P35716 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX11P35716 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX11P35716 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SOX11P35716 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.1■□□□□ 0.33
SOX11P35716 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 MIR149-201ENST00000384879 89 ntBASIC17.1■□□□□ 0.33
SOX11P35716 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.1■□□□□ 0.33
SOX11P35716 AP002383.4-201ENST00000442518 975 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms