Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
KCNA3P22001 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
KCNA3P22001 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.21■□□□□ 0.99
KCNA3P22001 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNA3P22001 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNA3P22001 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.21■□□□□ 0.99
KCNA3P22001 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.21■□□□□ 0.99
KCNA3P22001 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 MIR6080-201ENST00000617359 66 ntBASIC21.21■□□□□ 0.99
KCNA3P22001 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNA3P22001 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
KCNA3P22001 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNA3P22001 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.2■□□□□ 0.99
KCNA3P22001 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
KCNA3P22001 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNA3P22001 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 SPTLC1P1-201ENST00000447199 261 ntBASIC21.2■□□□□ 0.98
KCNA3P22001 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNA3P22001 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.2■□□□□ 0.98
KCNA3P22001 AL590560.3-201ENST00000623350 461 ntBASIC21.2■□□□□ 0.98
KCNA3P22001 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
KCNA3P22001 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.2■□□□□ 0.98
KCNA3P22001 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KCNA3P22001 AC073592.3-201ENST00000625118 1834 ntBASIC21.2■□□□□ 0.98
KCNA3P22001 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KCNA3P22001 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KCNA3P22001 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
KCNA3P22001 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
KCNA3P22001 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.19■□□□□ 0.98
KCNA3P22001 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.19■□□□□ 0.98
KCNA3P22001 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.19■□□□□ 0.98
KCNA3P22001 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 AL009183.1-201ENST00000603760 355 ntBASIC21.19■□□□□ 0.98
KCNA3P22001 AC009118.2-201ENST00000613275 655 ntBASIC21.19■□□□□ 0.98
KCNA3P22001 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
KCNA3P22001 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KCNA3P22001 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.18■□□□□ 0.98
KCNA3P22001 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNA3P22001 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.18■□□□□ 0.98
KCNA3P22001 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.18■□□□□ 0.98
KCNA3P22001 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNA3P22001 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNA3P22001 MIR346-201ENST00000362234 95 ntBASIC21.18■□□□□ 0.98
KCNA3P22001 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNA3P22001 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.18■□□□□ 0.98
KCNA3P22001 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.18■□□□□ 0.98
KCNA3P22001 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.18■□□□□ 0.98
KCNA3P22001 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.18■□□□□ 0.98
KCNA3P22001 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
KCNA3P22001 MIR4453-201ENST00000584019 89 ntBASIC21.18■□□□□ 0.98
KCNA3P22001 MIR6799-201ENST00000620297 69 ntBASIC21.18■□□□□ 0.98
KCNA3P22001 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
KCNA3P22001 AC100757.3-201ENST00000622361 1406 ntBASIC21.18■□□□□ 0.98
KCNA3P22001 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNA3P22001 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
KCNA3P22001 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNA3P22001 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
KCNA3P22001 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
KCNA3P22001 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.17■□□□□ 0.98
KCNA3P22001 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
KCNA3P22001 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.17■□□□□ 0.98
KCNA3P22001 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.17■□□□□ 0.98
KCNA3P22001 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.17■□□□□ 0.98
KCNA3P22001 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KCNA3P22001 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 CU639417.3-201ENST00000624240 1404 ntBASIC21.17■□□□□ 0.98
KCNA3P22001 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.17■□□□□ 0.98
KCNA3P22001 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KCNA3P22001 AC116562.4-201ENST00000641316 2276 ntBASIC21.17■□□□□ 0.98
KCNA3P22001 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
KCNA3P22001 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNA3P22001 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms