Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCLP18206 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.61■□□□□ 0.41
VCLP18206 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
VCLP18206 LINC01711-201ENST00000598340 967 ntBASIC17.61■□□□□ 0.41
VCLP18206 AL121772.3-201ENST00000610840 674 ntBASIC17.61■□□□□ 0.41
VCLP18206 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VCLP18206 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.61■□□□□ 0.41
VCLP18206 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.61■□□□□ 0.41
VCLP18206 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCLP18206 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.61■□□□□ 0.41
VCLP18206 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCLP18206 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
VCLP18206 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VCLP18206 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
VCLP18206 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VCLP18206 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCLP18206 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCLP18206 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VCLP18206 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.61■□□□□ 0.41
VCLP18206 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.6■□□□□ 0.41
VCLP18206 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VCLP18206 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VCLP18206 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.6■□□□□ 0.41
VCLP18206 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VCLP18206 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
VCLP18206 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.6■□□□□ 0.41
VCLP18206 AC099336.1-202ENST00000602961 463 ntBASIC17.6■□□□□ 0.41
VCLP18206 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.6■□□□□ 0.41
VCLP18206 NSUN5P1-202ENST00000421140 1535 ntBASIC17.6■□□□□ 0.41
VCLP18206 NSUN5P2-203ENST00000457352 1529 ntBASIC17.6■□□□□ 0.41
VCLP18206 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.6■□□□□ 0.41
VCLP18206 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
VCLP18206 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.6■□□□□ 0.41
VCLP18206 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.6■□□□□ 0.41
VCLP18206 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.6■□□□□ 0.41
VCLP18206 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VCLP18206 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCLP18206 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
VCLP18206 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VCLP18206 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 PP12613-201ENST00000424958 2230 ntBASIC17.59■□□□□ 0.41
VCLP18206 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VCLP18206 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.59■□□□□ 0.41
VCLP18206 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 AC006116.8-202ENST00000587620 1550 ntBASIC17.59■□□□□ 0.41
VCLP18206 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.59■□□□□ 0.41
VCLP18206 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
VCLP18206 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.59■□□□□ 0.41
VCLP18206 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.59■□□□□ 0.41
VCLP18206 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.59■□□□□ 0.41
VCLP18206 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.59■□□□□ 0.41
VCLP18206 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
VCLP18206 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.59■□□□□ 0.41
VCLP18206 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.59■□□□□ 0.41
VCLP18206 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.59■□□□□ 0.41
VCLP18206 AC116407.2-201ENST00000613639 860 ntBASIC17.59■□□□□ 0.41
VCLP18206 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms