Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC29.54■■■□□ 2.32
CFTRP13569 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 RNU1-129P-201ENST00000384064 167 ntBASIC29.54■■■□□ 2.32
CFTRP13569 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 AC022494.1-201ENST00000466044 728 ntBASIC29.54■■■□□ 2.32
CFTRP13569 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC29.54■■■□□ 2.32
CFTRP13569 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC29.54■■■□□ 2.32
CFTRP13569 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC29.54■■■□□ 2.32
CFTRP13569 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 U1.21-201ENST00000580816 167 ntBASIC29.54■■■□□ 2.32
CFTRP13569 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC29.54■■■□□ 2.32
CFTRP13569 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CFTRP13569 AL139327.4-201ENST00000612362 153 ntBASIC29.54■■■□□ 2.32
CFTRP13569 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC29.54■■■□□ 2.32
CFTRP13569 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CFTRP13569 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CFTRP13569 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CFTRP13569 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
CFTRP13569 AC009477.1-201ENST00000452936 217 ntBASIC29.53■■■□□ 2.32
CFTRP13569 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC29.53■■■□□ 2.32
CFTRP13569 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC29.53■■■□□ 2.32
CFTRP13569 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC29.53■■■□□ 2.32
CFTRP13569 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
CFTRP13569 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
CFTRP13569 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC29.52■■■□□ 2.32
CFTRP13569 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC29.52■■■□□ 2.32
CFTRP13569 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC29.52■■■□□ 2.32
CFTRP13569 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFTRP13569 AC142381.1-201ENST00000426099 345 ntBASIC29.52■■■□□ 2.32
CFTRP13569 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC29.52■■■□□ 2.32
CFTRP13569 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC29.52■■■□□ 2.32
CFTRP13569 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
CFTRP13569 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC29.52■■■□□ 2.32
CFTRP13569 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC29.52■■■□□ 2.32
CFTRP13569 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CFTRP13569 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CFTRP13569 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CFTRP13569 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
CFTRP13569 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
CFTRP13569 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC29.51■■■□□ 2.31
CFTRP13569 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC29.51■■■□□ 2.31
CFTRP13569 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC29.51■■■□□ 2.31
CFTRP13569 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC29.51■■■□□ 2.31
CFTRP13569 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
CFTRP13569 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFTRP13569 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
CFTRP13569 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CFTRP13569 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC29.51■■■□□ 2.31
CFTRP13569 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC29.51■■■□□ 2.31
CFTRP13569 MIR4453-201ENST00000584019 89 ntBASIC29.51■■■□□ 2.31
CFTRP13569 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC29.51■■■□□ 2.31
CFTRP13569 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFTRP13569 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFTRP13569 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
CFTRP13569 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC29.51■■■□□ 2.31
CFTRP13569 AC012569.1-201ENST00000591191 1524 ntBASIC29.51■■■□□ 2.31
CFTRP13569 AP000997.3-201ENST00000623333 2250 ntBASIC29.51■■■□□ 2.31
CFTRP13569 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CFTRP13569 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC29.5■■■□□ 2.31
CFTRP13569 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFTRP13569 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFTRP13569 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFTRP13569 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFTRP13569 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 ATP5G2P4-201ENST00000442175 420 ntBASIC29.5■■■□□ 2.31
CFTRP13569 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC29.5■■■□□ 2.31
CFTRP13569 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 LY6E-204ENST00000519546 971 ntTSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CFTRP13569 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC29.5■■■□□ 2.31
CFTRP13569 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 AC027307.2-201ENST00000591252 911 ntBASIC29.5■■■□□ 2.31
CFTRP13569 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CFTRP13569 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC29.5■■■□□ 2.31
CFTRP13569 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC29.5■■■□□ 2.31
CFTRP13569 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC29.49■■■□□ 2.31
CFTRP13569 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CFTRP13569 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CFTRP13569 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC29.49■■■□□ 2.31
CFTRP13569 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC29.49■■■□□ 2.31
CFTRP13569 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC29.49■■■□□ 2.31
CFTRP13569 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC29.49■■■□□ 2.31
CFTRP13569 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CFTRP13569 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CFTRP13569 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC29.49■■■□□ 2.31
CFTRP13569 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CFTRP13569 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CFTRP13569 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC29.49■■■□□ 2.31
CFTRP13569 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC29.49■■■□□ 2.31
CFTRP13569 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CFTRP13569 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC29.49■■■□□ 2.31
CFTRP13569 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms