Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FAM228BP0C875 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FAM228BP0C875 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.63■□□□□ 0.57
FAM228BP0C875 AL671277.2-201ENST00000458060 996 ntBASIC18.63■□□□□ 0.57
FAM228BP0C875 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
FAM228BP0C875 GUSBP12-201ENST00000513727 720 ntBASIC18.63■□□□□ 0.57
FAM228BP0C875 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.63■□□□□ 0.57
FAM228BP0C875 AC022616.7-201ENST00000525383 220 ntBASIC18.63■□□□□ 0.57
FAM228BP0C875 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
FAM228BP0C875 LINC01023-201ENST00000606054 436 ntBASIC18.63■□□□□ 0.57
FAM228BP0C875 AL138831.2-201ENST00000606564 490 ntBASIC18.63■□□□□ 0.57
FAM228BP0C875 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FAM228BP0C875 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.63■□□□□ 0.57
FAM228BP0C875 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FAM228BP0C875 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.63■□□□□ 0.57
FAM228BP0C875 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 AL049757.1-201ENST00000616842 1596 ntBASIC18.63■□□□□ 0.57
FAM228BP0C875 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FAM228BP0C875 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.63■□□□□ 0.57
FAM228BP0C875 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.63■□□□□ 0.57
FAM228BP0C875 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.63■□□□□ 0.57
FAM228BP0C875 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FAM228BP0C875 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FAM228BP0C875 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.62■□□□□ 0.57
FAM228BP0C875 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.62■□□□□ 0.57
FAM228BP0C875 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.62■□□□□ 0.57
FAM228BP0C875 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
FAM228BP0C875 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
FAM228BP0C875 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 MYCLP1-201ENST00000372451 1075 ntBASIC18.62■□□□□ 0.57
FAM228BP0C875 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FAM228BP0C875 TSPY22P-201ENST00000427496 604 ntBASIC18.62■□□□□ 0.57
FAM228BP0C875 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.62■□□□□ 0.57
FAM228BP0C875 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.62■□□□□ 0.57
FAM228BP0C875 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.62■□□□□ 0.57
FAM228BP0C875 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
FAM228BP0C875 AL592071.1-201ENST00000611956 408 ntBASIC18.62■□□□□ 0.57
FAM228BP0C875 AC124864.1-201ENST00000623408 392 ntBASIC18.62■□□□□ 0.57
FAM228BP0C875 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.62■□□□□ 0.57
FAM228BP0C875 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
FAM228BP0C875 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
FAM228BP0C875 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 OR6D1P-202ENST00000641007 5290 ntBASIC18.62■□□□□ 0.57
FAM228BP0C875 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM228BP0C875 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.62■□□□□ 0.57
FAM228BP0C875 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
FAM228BP0C875 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
FAM228BP0C875 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FAM228BP0C875 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.61■□□□□ 0.57
FAM228BP0C875 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
FAM228BP0C875 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
FAM228BP0C875 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.61■□□□□ 0.57
FAM228BP0C875 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FAM228BP0C875 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
FAM228BP0C875 IGHV3-52-201ENST00000519770 353 ntBASIC18.61■□□□□ 0.57
FAM228BP0C875 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FAM228BP0C875 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FAM228BP0C875 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.61■□□□□ 0.57
FAM228BP0C875 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM228BP0C875 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
FAM228BP0C875 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms