Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.62■□□□□ 0.73
HOXC6P09630 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXC6P09630 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXC6P09630 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HOXC6P09630 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC6P09630 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
HOXC6P09630 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC6P09630 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC6P09630 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC6P09630 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.61■□□□□ 0.73
HOXC6P09630 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC6P09630 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HOXC6P09630 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC6P09630 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC6P09630 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXC6P09630 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HOXC6P09630 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC6P09630 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXC6P09630 AC009093.7-201ENST00000623853 1223 ntBASIC19.61■□□□□ 0.73
HOXC6P09630 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC6P09630 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
HOXC6P09630 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HOXC6P09630 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 AC002056.1-201ENST00000395613 760 ntBASIC19.6■□□□□ 0.73
HOXC6P09630 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXC6P09630 AL513480.1-201ENST00000451731 511 ntBASIC19.6■□□□□ 0.73
HOXC6P09630 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.6■□□□□ 0.73
HOXC6P09630 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC6P09630 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXC6P09630 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC6P09630 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXC6P09630 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HOXC6P09630 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HOXC6P09630 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
HOXC6P09630 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HOXC6P09630 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC6P09630 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC6P09630 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC6P09630 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 AC129492.6-201ENST00000611383 1305 ntBASIC19.59■□□□□ 0.73
HOXC6P09630 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HOXC6P09630 AL627223.1-201ENST00000416693 442 ntBASIC19.59■□□□□ 0.73
HOXC6P09630 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC6P09630 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.59■□□□□ 0.73
HOXC6P09630 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXC6P09630 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC6P09630 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXC6P09630 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXC6P09630 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HOXC6P09630 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
HOXC6P09630 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC6P09630 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC6P09630 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC6P09630 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC6P09630 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC6P09630 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
HOXC6P09630 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC6P09630 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXC6P09630 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXC6P09630 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC6P09630 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC6P09630 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms