Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 AC116353.5-201ENST00000638148 1699 ntBASIC19.62■□□□□ 0.73
TPM3P06753 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.62■□□□□ 0.73
TPM3P06753 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 LINC00167-201ENST00000530583 1419 ntBASIC19.62■□□□□ 0.73
TPM3P06753 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.62■□□□□ 0.73
TPM3P06753 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.62■□□□□ 0.73
TPM3P06753 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.62■□□□□ 0.73
TPM3P06753 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.62■□□□□ 0.73
TPM3P06753 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.62■□□□□ 0.73
TPM3P06753 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.62■□□□□ 0.73
TPM3P06753 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.62■□□□□ 0.73
TPM3P06753 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.62■□□□□ 0.73
TPM3P06753 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TPM3P06753 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 AC009949.1-201ENST00000623048 1830 ntBASIC19.62■□□□□ 0.73
TPM3P06753 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.62■□□□□ 0.73
TPM3P06753 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TPM3P06753 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TPM3P06753 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 AC005915.1-201ENST00000624912 2018 ntBASIC19.61■□□□□ 0.73
TPM3P06753 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.61■□□□□ 0.73
TPM3P06753 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 AC026471.5-201ENST00000615068 467 ntBASIC19.61■□□□□ 0.73
TPM3P06753 AC113410.3-201ENST00000623366 203 ntBASIC19.61■□□□□ 0.73
TPM3P06753 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 AC006449.5-201ENST00000610658 2098 ntBASIC19.61■□□□□ 0.73
TPM3P06753 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TPM3P06753 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TPM3P06753 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TPM3P06753 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TPM3P06753 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TPM3P06753 REXO1L11P-201ENST00000620964 1927 ntBASIC19.61■□□□□ 0.73
TPM3P06753 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TPM3P06753 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.6■□□□□ 0.73
TPM3P06753 LINC02199-201ENST00000506655 2702 ntBASIC19.6■□□□□ 0.73
TPM3P06753 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM3P06753 FLJ16779-201ENST00000612722 7638 ntBASIC19.6■□□□□ 0.73
TPM3P06753 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.6■□□□□ 0.73
TPM3P06753 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 UNC93B2-201ENST00000285383 730 ntBASIC19.6■□□□□ 0.73
TPM3P06753 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.6■□□□□ 0.73
TPM3P06753 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.6■□□□□ 0.73
TPM3P06753 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TPM3P06753 MIR4651-201ENST00000582622 73 ntBASIC19.6■□□□□ 0.73
TPM3P06753 AC233702.5-201ENST00000584107 538 ntBASIC19.6■□□□□ 0.73
TPM3P06753 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.6■□□□□ 0.73
TPM3P06753 AL049637.2-201ENST00000641778 930 ntBASIC19.6■□□□□ 0.73
TPM3P06753 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.6■□□□□ 0.73
TPM3P06753 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TPM3P06753 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TPM3P06753 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM3P06753 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TPM3P06753 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM3P06753 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM3P06753 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM3P06753 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms