Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC006504.4-201ENST00000592118 1568 ntBASIC20.96■□□□□ 0.95
CHGBP05060 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGBP05060 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGBP05060 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CHGBP05060 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.95
CHGBP05060 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGBP05060 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.95■□□□□ 0.94
CHGBP05060 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHGBP05060 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGBP05060 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGBP05060 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGBP05060 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.95■□□□□ 0.94
CHGBP05060 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHGBP05060 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CHGBP05060 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.95■□□□□ 0.94
CHGBP05060 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.95■□□□□ 0.94
CHGBP05060 AP001005.1-201ENST00000571755 1248 ntBASIC20.95■□□□□ 0.94
CHGBP05060 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.95■□□□□ 0.94
CHGBP05060 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHGBP05060 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGBP05060 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHGBP05060 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGBP05060 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CHGBP05060 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHGBP05060 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGBP05060 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.95■□□□□ 0.94
CHGBP05060 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGBP05060 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHGBP05060 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.94■□□□□ 0.94
CHGBP05060 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 AC073621.1-201ENST00000392730 636 ntBASIC20.94■□□□□ 0.94
CHGBP05060 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 ELK2BP-201ENST00000415014 1224 ntBASIC20.94■□□□□ 0.94
CHGBP05060 SIGLEC30P-201ENST00000455569 941 ntBASIC20.94■□□□□ 0.94
CHGBP05060 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.94■□□□□ 0.94
CHGBP05060 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.94■□□□□ 0.94
CHGBP05060 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.94■□□□□ 0.94
CHGBP05060 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHGBP05060 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGBP05060 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGBP05060 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHGBP05060 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.93■□□□□ 0.94
CHGBP05060 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.93■□□□□ 0.94
CHGBP05060 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 LINC00982-205ENST00000420957 435 ntBASIC20.93■□□□□ 0.94
CHGBP05060 KRT18P27-201ENST00000427733 1299 ntBASIC20.93■□□□□ 0.94
CHGBP05060 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.93■□□□□ 0.94
CHGBP05060 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.93■□□□□ 0.94
CHGBP05060 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.93■□□□□ 0.94
CHGBP05060 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CHGBP05060 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHGBP05060 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.93■□□□□ 0.94
CHGBP05060 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.93■□□□□ 0.94
CHGBP05060 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.93■□□□□ 0.94
CHGBP05060 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGBP05060 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.92■□□□□ 0.94
CHGBP05060 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.92■□□□□ 0.94
CHGBP05060 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHGBP05060 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms