Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC140912.1-201ENST00000577171 1054 ntBASIC10.75□□□□□ -0.69
APOBP04114 AL162274.1-201ENST00000617191 1098 ntBASIC10.75□□□□□ -0.69
APOBP04114 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC10.75□□□□□ -0.69
APOBP04114 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.75□□□□□ -0.69
APOBP04114 SNX29P1-201ENST00000548357 1007 ntBASIC10.75□□□□□ -0.69
APOBP04114 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 AC016027.1-202ENST00000607927 1699 ntBASIC10.75□□□□□ -0.69
APOBP04114 BX276092.7-203ENST00000637198 1536 ntBASIC10.75□□□□□ -0.69
APOBP04114 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 IGHV3-42-201ENST00000520410 361 ntBASIC10.75□□□□□ -0.69
APOBP04114 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC10.75□□□□□ -0.69
APOBP04114 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 AP000997.3-201ENST00000623333 2250 ntBASIC10.75□□□□□ -0.69
APOBP04114 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
APOBP04114 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
APOBP04114 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.75□□□□□ -0.69
APOBP04114 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.75□□□□□ -0.69
APOBP04114 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.75□□□□□ -0.69
APOBP04114 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.75□□□□□ -0.69
APOBP04114 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
APOBP04114 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
APOBP04114 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC10.74□□□□□ -0.69
APOBP04114 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
APOBP04114 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC10.74□□□□□ -0.69
APOBP04114 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.74□□□□□ -0.69
APOBP04114 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 HNRNPRP1-201ENST00000453465 1695 ntBASIC10.74□□□□□ -0.69
APOBP04114 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
APOBP04114 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
APOBP04114 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.74□□□□□ -0.69
APOBP04114 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.74□□□□□ -0.69
APOBP04114 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.74□□□□□ -0.69
APOBP04114 SLC25A6P5-201ENST00000435663 894 ntBASIC10.74□□□□□ -0.69
APOBP04114 BNIP3P42-201ENST00000454982 569 ntBASIC10.74□□□□□ -0.69
APOBP04114 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.74□□□□□ -0.69
APOBP04114 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.74□□□□□ -0.69
APOBP04114 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.74□□□□□ -0.69
APOBP04114 BNIP3P29-201ENST00000598302 571 ntBASIC10.74□□□□□ -0.69
APOBP04114 AC011447.5-201ENST00000616168 564 ntBASIC10.74□□□□□ -0.69
APOBP04114 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.74□□□□□ -0.69
APOBP04114 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.74□□□□□ -0.69
APOBP04114 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC10.74□□□□□ -0.69
APOBP04114 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 MIR658-201ENST00000385210 100 ntBASIC10.74□□□□□ -0.69
APOBP04114 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.74□□□□□ -0.69
APOBP04114 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 MYCLP1-201ENST00000372451 1075 ntBASIC10.74□□□□□ -0.69
APOBP04114 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC10.74□□□□□ -0.69
APOBP04114 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
APOBP04114 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.73□□□□□ -0.69
APOBP04114 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.73□□□□□ -0.69
APOBP04114 AC002558.1-201ENST00000488906 803 ntBASIC10.73□□□□□ -0.69
APOBP04114 AC106886.1-201ENST00000568660 600 ntBASIC10.73□□□□□ -0.69
APOBP04114 AC004233.3-201ENST00000607794 1269 ntBASIC10.73□□□□□ -0.69
APOBP04114 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOBP04114 AKAP8P1-201ENST00000434743 1349 ntBASIC10.73□□□□□ -0.69
APOBP04114 ANKRD19P-201ENST00000338192 862 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms