Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SPTLC1P1-201ENST00000447199 261 ntBASIC17.41■□□□□ 0.38
PDGFBP01127 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.41■□□□□ 0.38
PDGFBP01127 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.41■□□□□ 0.38
PDGFBP01127 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.41■□□□□ 0.38
PDGFBP01127 ALG1L8P-201ENST00000533887 760 ntBASIC17.41■□□□□ 0.38
PDGFBP01127 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PDGFBP01127 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PDGFBP01127 MIR4453-201ENST00000584019 89 ntBASIC17.41■□□□□ 0.38
PDGFBP01127 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PDGFBP01127 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFBP01127 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDGFBP01127 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFBP01127 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFBP01127 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDGFBP01127 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFBP01127 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFBP01127 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.41■□□□□ 0.38
PDGFBP01127 BX276092.7-203ENST00000637198 1536 ntBASIC17.41■□□□□ 0.38
PDGFBP01127 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFBP01127 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDGFBP01127 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.41■□□□□ 0.38
PDGFBP01127 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.41■□□□□ 0.38
PDGFBP01127 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.41■□□□□ 0.38
PDGFBP01127 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.41■□□□□ 0.38
PDGFBP01127 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.41■□□□□ 0.38
PDGFBP01127 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFBP01127 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PDGFBP01127 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.4■□□□□ 0.38
PDGFBP01127 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PDGFBP01127 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.4■□□□□ 0.38
PDGFBP01127 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFBP01127 AC027369.6-201ENST00000525520 931 ntBASIC17.4■□□□□ 0.38
PDGFBP01127 AC107918.2-201ENST00000530817 355 ntBASIC17.4■□□□□ 0.38
PDGFBP01127 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.4■□□□□ 0.38
PDGFBP01127 KRT8P23-201ENST00000560090 1207 ntBASIC17.4■□□□□ 0.38
PDGFBP01127 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.4■□□□□ 0.38
PDGFBP01127 AL590560.3-201ENST00000623350 461 ntBASIC17.4■□□□□ 0.38
PDGFBP01127 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFBP01127 AC084121.4-201ENST00000641598 221 ntBASIC17.4■□□□□ 0.38
PDGFBP01127 AF228730.8-201ENST00000642140 221 ntBASIC17.4■□□□□ 0.38
PDGFBP01127 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDGFBP01127 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFBP01127 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFBP01127 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFBP01127 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFBP01127 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.39■□□□□ 0.38
PDGFBP01127 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDGFBP01127 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.39■□□□□ 0.38
PDGFBP01127 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDGFBP01127 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDGFBP01127 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFBP01127 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFBP01127 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFBP01127 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFBP01127 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
PDGFBP01127 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFBP01127 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.39■□□□□ 0.37
PDGFBP01127 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.39■□□□□ 0.37
PDGFBP01127 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFBP01127 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFBP01127 AC084346.2-201ENST00000607097 949 ntBASIC17.39■□□□□ 0.37
PDGFBP01127 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PDGFBP01127 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFBP01127 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PDGFBP01127 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFBP01127 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFBP01127 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PDGFBP01127 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFBP01127 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFBP01127 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFBP01127 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.38■□□□□ 0.37
PDGFBP01127 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFBP01127 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms