Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.93■□□□□ 0.46
MT-CO1P00395 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MT-CO1P00395 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MT-CO1P00395 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-CO1P00395 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.92■□□□□ 0.46
MT-CO1P00395 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MT-CO1P00395 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-CO1P00395 REXO1L11P-201ENST00000620964 1927 ntBASIC17.92■□□□□ 0.46
MT-CO1P00395 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-CO1P00395 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MT-CO1P00395 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.92■□□□□ 0.46
MT-CO1P00395 RNPS1P1-201ENST00000507437 918 ntBASIC17.92■□□□□ 0.46
MT-CO1P00395 RNA5SP419-201ENST00000515908 135 ntBASIC17.92■□□□□ 0.46
MT-CO1P00395 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-CO1P00395 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.92■□□□□ 0.46
MT-CO1P00395 AC109462.3-201ENST00000573934 613 ntBASIC17.92■□□□□ 0.46
MT-CO1P00395 NKAPP1-205ENST00000585790 367 ntBASIC17.92■□□□□ 0.46
MT-CO1P00395 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.92■□□□□ 0.46
MT-CO1P00395 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.92■□□□□ 0.46
MT-CO1P00395 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 HLA-A-201ENST00000376802 1334 ntBASIC17.92■□□□□ 0.46
MT-CO1P00395 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-CO1P00395 AL356309.3-201ENST00000624132 1934 ntBASIC17.92■□□□□ 0.46
MT-CO1P00395 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-CO1P00395 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-CO1P00395 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
MT-CO1P00395 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-CO1P00395 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 AC132938.5-201ENST00000624980 1813 ntBASIC17.91■□□□□ 0.46
MT-CO1P00395 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 AL353593.2-201ENST00000602529 1483 ntBASIC17.91■□□□□ 0.46
MT-CO1P00395 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.91■□□□□ 0.46
MT-CO1P00395 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 KRT18P67-201ENST00000432816 1264 ntBASIC17.91■□□□□ 0.46
MT-CO1P00395 HNRNPDP1-201ENST00000439535 754 ntBASIC17.91■□□□□ 0.46
MT-CO1P00395 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.91■□□□□ 0.46
MT-CO1P00395 AC021087.4-201ENST00000563761 564 ntBASIC17.91■□□□□ 0.46
MT-CO1P00395 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 AC073592.5-201ENST00000624854 528 ntBASIC17.91■□□□□ 0.46
MT-CO1P00395 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
MT-CO1P00395 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-CO1P00395 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-CO1P00395 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-CO1P00395 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
MT-CO1P00395 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
MT-CO1P00395 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-CO1P00395 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-CO1P00395 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.9■□□□□ 0.46
MT-CO1P00395 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.9■□□□□ 0.46
MT-CO1P00395 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-CO1P00395 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.9■□□□□ 0.46
MT-CO1P00395 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms