Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALDH1A1P00352 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.76■□□□□ 0.75
ALDH1A1P00352 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 MRPS18AP1-201ENST00000414458 589 ntBASIC19.75■□□□□ 0.75
ALDH1A1P00352 GPR53P-205ENST00000457298 1084 ntBASIC19.75■□□□□ 0.75
ALDH1A1P00352 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 AL009183.1-201ENST00000603760 355 ntBASIC19.75■□□□□ 0.75
ALDH1A1P00352 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALDH1A1P00352 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ALDH1A1P00352 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.74■□□□□ 0.75
ALDH1A1P00352 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 AC093677.2-201ENST00000600169 1863 ntBASIC19.74■□□□□ 0.75
ALDH1A1P00352 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.74■□□□□ 0.75
ALDH1A1P00352 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.74■□□□□ 0.75
ALDH1A1P00352 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.74■□□□□ 0.75
ALDH1A1P00352 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 AC109635.5-201ENST00000533593 962 ntBASIC19.74■□□□□ 0.75
ALDH1A1P00352 AC126763.1-201ENST00000552015 2118 ntBASIC19.74■□□□□ 0.75
ALDH1A1P00352 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.74■□□□□ 0.75
ALDH1A1P00352 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALDH1A1P00352 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.74■□□□□ 0.75
ALDH1A1P00352 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.74■□□□□ 0.75
ALDH1A1P00352 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 AL135999.2-201ENST00000622438 1686 ntBASIC19.73■□□□□ 0.75
ALDH1A1P00352 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 HMGA1P7-201ENST00000406908 502 ntBASIC19.73■□□□□ 0.75
ALDH1A1P00352 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 MIR6799-201ENST00000620297 69 ntBASIC19.73■□□□□ 0.75
ALDH1A1P00352 AC073592.8-201ENST00000624126 511 ntBASIC19.73■□□□□ 0.75
ALDH1A1P00352 AC008267.7-201ENST00000624570 1194 ntBASIC19.73■□□□□ 0.75
ALDH1A1P00352 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALDH1A1P00352 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
ALDH1A1P00352 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms