Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BEST1O76090 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST1O76090 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST1O76090 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST1O76090 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
BEST1O76090 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST1O76090 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
BEST1O76090 PCDHB18P-201ENST00000524813 2368 ntBASIC18.3■□□□□ 0.52
BEST1O76090 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BEST1O76090 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST1O76090 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST1O76090 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST1O76090 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
BEST1O76090 ELK2BP-201ENST00000415014 1224 ntBASIC18.3■□□□□ 0.52
BEST1O76090 AC098831.1-202ENST00000438821 336 ntBASIC18.3■□□□□ 0.52
BEST1O76090 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.3■□□□□ 0.52
BEST1O76090 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST1O76090 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BEST1O76090 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST1O76090 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BEST1O76090 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST1O76090 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST1O76090 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST1O76090 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BEST1O76090 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST1O76090 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST1O76090 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST1O76090 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.29■□□□□ 0.52
BEST1O76090 AL022342.1-201ENST00000400363 863 ntBASIC18.29■□□□□ 0.52
BEST1O76090 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.29■□□□□ 0.52
BEST1O76090 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.29■□□□□ 0.52
BEST1O76090 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.29■□□□□ 0.52
BEST1O76090 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.29■□□□□ 0.52
BEST1O76090 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.29■□□□□ 0.52
BEST1O76090 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.29■□□□□ 0.52
BEST1O76090 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST1O76090 AL353135.1-201ENST00000606729 504 ntBASIC18.29■□□□□ 0.52
BEST1O76090 AL139424.1-201ENST00000607572 797 ntBASIC18.29■□□□□ 0.52
BEST1O76090 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.29■□□□□ 0.52
BEST1O76090 AC117500.6-201ENST00000624871 588 ntBASIC18.29■□□□□ 0.52
BEST1O76090 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST1O76090 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.29■□□□□ 0.52
BEST1O76090 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
BEST1O76090 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.29■□□□□ 0.52
BEST1O76090 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BEST1O76090 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST1O76090 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
BEST1O76090 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST1O76090 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.28■□□□□ 0.52
BEST1O76090 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST1O76090 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST1O76090 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST1O76090 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST1O76090 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST1O76090 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
BEST1O76090 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
BEST1O76090 AC006557.2-201ENST00000592985 1240 ntBASIC18.28■□□□□ 0.52
BEST1O76090 AL356488.2-201ENST00000602755 427 ntBASIC18.28■□□□□ 0.52
BEST1O76090 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST1O76090 AF228730.7-201ENST00000641842 219 ntBASIC18.28■□□□□ 0.52
BEST1O76090 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
BEST1O76090 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST1O76090 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST1O76090 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST1O76090 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms