Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
OPHN1O60890 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPHN1O60890 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPHN1O60890 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPHN1O60890 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.27■□□□□ 0.51
OPHN1O60890 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPHN1O60890 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPHN1O60890 AL355312.1-201ENST00000407115 2176 ntBASIC18.27■□□□□ 0.51
OPHN1O60890 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
OPHN1O60890 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.26■□□□□ 0.51
OPHN1O60890 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
OPHN1O60890 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.26■□□□□ 0.51
OPHN1O60890 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 AC009053.2-201ENST00000563701 2365 ntBASIC18.26■□□□□ 0.51
OPHN1O60890 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.26■□□□□ 0.51
OPHN1O60890 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 AC133963.1-201ENST00000504166 1679 ntBASIC18.26■□□□□ 0.51
OPHN1O60890 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
OPHN1O60890 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.26■□□□□ 0.51
OPHN1O60890 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
OPHN1O60890 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.26■□□□□ 0.51
OPHN1O60890 DDX43P3-201ENST00000441064 443 ntBASIC18.26■□□□□ 0.51
OPHN1O60890 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.26■□□□□ 0.51
OPHN1O60890 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.26■□□□□ 0.51
OPHN1O60890 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
OPHN1O60890 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.26■□□□□ 0.51
OPHN1O60890 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.26■□□□□ 0.51
OPHN1O60890 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 KRT8P47-201ENST00000604727 1398 ntBASIC18.26■□□□□ 0.51
OPHN1O60890 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPHN1O60890 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
OPHN1O60890 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.26■□□□□ 0.51
OPHN1O60890 AC009949.1-201ENST00000623048 1830 ntBASIC18.26■□□□□ 0.51
OPHN1O60890 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
OPHN1O60890 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
OPHN1O60890 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.25■□□□□ 0.51
OPHN1O60890 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
OPHN1O60890 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.25■□□□□ 0.51
OPHN1O60890 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.25■□□□□ 0.51
OPHN1O60890 PMS2P1-201ENST00000431037 1228 ntBASIC18.25■□□□□ 0.51
OPHN1O60890 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.25■□□□□ 0.51
OPHN1O60890 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.25■□□□□ 0.51
OPHN1O60890 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.25■□□□□ 0.51
OPHN1O60890 AL390719.2-201ENST00000606993 987 ntBASIC18.25■□□□□ 0.51
OPHN1O60890 AC139530.3-201ENST00000620344 690 ntBASIC18.25■□□□□ 0.51
OPHN1O60890 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.25■□□□□ 0.51
OPHN1O60890 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
OPHN1O60890 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
OPHN1O60890 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPHN1O60890 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
OPHN1O60890 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
OPHN1O60890 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPHN1O60890 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms