Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAF3IP2O43734 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 AC046185.3-201ENST00000623228 1824 ntBASIC15.57■□□□□ 0.08
TRAF3IP2O43734 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 NUS1P1-201ENST00000446295 882 ntBASIC15.57■□□□□ 0.08
TRAF3IP2O43734 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 MIR5100-201ENST00000579544 119 ntBASIC15.57■□□□□ 0.08
TRAF3IP2O43734 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.57■□□□□ 0.08
TRAF3IP2O43734 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 AC016396.2-201ENST00000562575 1417 ntBASIC15.57■□□□□ 0.08
TRAF3IP2O43734 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAF3IP2O43734 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AC003669.1-201ENST00000334569 611 ntBASIC15.56■□□□□ 0.08
TRAF3IP2O43734 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 FOSL1P1-201ENST00000511041 816 ntBASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 AC073592.5-201ENST00000624854 528 ntBASIC15.56■□□□□ 0.08
TRAF3IP2O43734 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 PMPCAP1-201ENST00000508114 1576 ntBASIC15.56■□□□□ 0.08
TRAF3IP2O43734 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAF3IP2O43734 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms