Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.34■■□□□ 1.17
CHL1O00533 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.34■■□□□ 1.17
CHL1O00533 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.34■■□□□ 1.17
CHL1O00533 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.34■■□□□ 1.17
CHL1O00533 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.34■■□□□ 1.17
CHL1O00533 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CHL1O00533 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CHL1O00533 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 PP12613-201ENST00000424958 2230 ntBASIC22.34■■□□□ 1.17
CHL1O00533 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHL1O00533 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.33■■□□□ 1.17
CHL1O00533 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
CHL1O00533 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
CHL1O00533 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHL1O00533 AC116353.5-201ENST00000638148 1699 ntBASIC22.33■■□□□ 1.17
CHL1O00533 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHL1O00533 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.33■■□□□ 1.17
CHL1O00533 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHL1O00533 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
CHL1O00533 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CHL1O00533 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHL1O00533 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CHL1O00533 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHL1O00533 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CHL1O00533 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.33■■□□□ 1.17
CHL1O00533 AL591424.1-201ENST00000442569 1213 ntBASIC22.33■■□□□ 1.17
CHL1O00533 KRT18P2-201ENST00000447938 1258 ntBASIC22.33■■□□□ 1.17
CHL1O00533 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.16
CHL1O00533 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
CHL1O00533 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.33■■□□□ 1.16
CHL1O00533 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHL1O00533 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHL1O00533 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHL1O00533 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHL1O00533 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHL1O00533 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
CHL1O00533 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHL1O00533 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CHL1O00533 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CHL1O00533 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CHL1O00533 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.32■■□□□ 1.16
CHL1O00533 VN2R19P-201ENST00000442399 1052 ntBASIC22.32■■□□□ 1.16
CHL1O00533 HCG4B-203ENST00000450128 991 ntBASIC22.32■■□□□ 1.16
CHL1O00533 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.32■■□□□ 1.16
CHL1O00533 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.32■■□□□ 1.16
CHL1O00533 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 GGTLC5P-201ENST00000617623 998 ntBASIC22.32■■□□□ 1.16
CHL1O00533 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CHL1O00533 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CHL1O00533 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.32■■□□□ 1.16
CHL1O00533 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHL1O00533 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 MED15P5-201ENST00000423150 992 ntBASIC22.31■■□□□ 1.16
CHL1O00533 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 KRT18P3-201ENST00000451602 1288 ntBASIC22.31■■□□□ 1.16
CHL1O00533 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.31■■□□□ 1.16
CHL1O00533 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.31■■□□□ 1.16
CHL1O00533 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.31■■□□□ 1.16
CHL1O00533 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.31■■□□□ 1.16
CHL1O00533 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.31■■□□□ 1.16
CHL1O00533 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHL1O00533 PI4KAP1-204ENST00000612579 1703 ntBASIC22.31■■□□□ 1.16
CHL1O00533 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHL1O00533 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHL1O00533 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHL1O00533 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHL1O00533 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CHL1O00533 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.3■■□□□ 1.16
CHL1O00533 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHL1O00533 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHL1O00533 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHL1O00533 MIR940-201ENST00000401276 94 ntBASIC22.3■■□□□ 1.16
CHL1O00533 IGLL3P-201ENST00000412472 434 ntBASIC22.3■■□□□ 1.16
CHL1O00533 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.3■■□□□ 1.16
CHL1O00533 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms