Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 VENTXP5-201ENST00000523979 775 ntBASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 RNF126P1-202ENST00000569893 925 ntBASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 AC019129.2-201ENST00000609837 1235 ntBASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV9S1A1TA0A576 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AL137013.1-201ENST00000432946 1228 ntBASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 AC012306.2-201ENST00000609350 630 ntBASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 HYMAI.1-201ENST00000620949 238 ntBASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 PKD1P1-201ENST00000458669 6805 ntBASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV9S1A1TA0A576 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 Z83836.1-201ENST00000624605 1642 ntBASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TCRBV9S1A1TA0A576 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 AC005363.2-201ENST00000618631 242 ntBASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms