Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC034236.2-201ENST00000606662 1610 ntBASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 TOB2P1-201ENST00000469761 992 ntBASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 AL691432.3-201ENST00000621860 400 ntBASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.04■□□□□ 0.96
DDX49Q9Y6V7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 AP000593.1-201ENST00000393668 712 ntBASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX49Q9Y6V7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 UBALD1-205ENST00000590891 2641 ntBASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 AL390719.2-201ENST00000606993 987 ntBASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX49Q9Y6V7 AC008894.3-201ENST00000624324 3103 ntBASIC21.02■□□□□ 0.95
DDX49Q9Y6V7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
DDX49Q9Y6V7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DDX49Q9Y6V7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms