Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AL391005.1-201ENST00000623953 2435 ntBASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHGA3Q9Y5H0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 POLD2P1-201ENST00000511220 997 ntBASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 AL139288.1-201ENST00000623748 933 ntBASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDHGA3Q9Y5H0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 AC112698.1-201ENST00000510299 916 ntBASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 IGHV3-22-201ENST00000520721 359 ntBASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 SART3-203ENST00000546611 1184 ntBASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHGA3Q9Y5H0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 AC126763.1-201ENST00000552015 2118 ntBASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHGA3Q9Y5H0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms