Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 MIR7706-201ENST00000613747 67 ntBASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 GNAS-203ENST00000306120 1878 ntBASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB9Q9Y5E1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 RBM17P3-201ENST00000417687 1192 ntBASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 MIR3687-2-201ENST00000577708 61 ntBASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 AC027601.4-201ENST00000611259 610 ntBASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 MIR3687-1-201ENST00000614492 61 ntBASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 AC079781.4-201ENST00000641908 219 ntBASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHB9Q9Y5E1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB9Q9Y5E1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 OR6D1P-202ENST00000641007 5290 ntBASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB9Q9Y5E1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 AL049757.1-201ENST00000616842 1596 ntBASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 AC098831.1-202ENST00000438821 336 ntBASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 ABCD1P5-201ENST00000445663 754 ntBASIC17.75■□□□□ 0.43
PCDHB9Q9Y5E1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms