Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 KLF4P1-201ENST00000412782 1185 ntBASIC19.18■□□□□ 0.66
USP20Q9Y2K6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 SLC25A1P1-201ENST00000528351 927 ntBASIC19.18■□□□□ 0.66
USP20Q9Y2K6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 AL139288.1-201ENST00000623748 933 ntBASIC19.18■□□□□ 0.66
USP20Q9Y2K6 AC073592.4-201ENST00000623827 446 ntBASIC19.18■□□□□ 0.66
USP20Q9Y2K6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 AC106820.2-201ENST00000563775 3264 ntBASIC19.18■□□□□ 0.66
USP20Q9Y2K6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP20Q9Y2K6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 AC116407.3-201ENST00000623905 1129 ntBASIC19.17■□□□□ 0.66
USP20Q9Y2K6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
USP20Q9Y2K6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 AL590627.1-203ENST00000421194 1026 ntBASIC19.16■□□□□ 0.66
USP20Q9Y2K6 AL020989.1-201ENST00000422979 469 ntBASIC19.16■□□□□ 0.66
USP20Q9Y2K6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 OR7E14P-202ENST00000530490 1290 ntBASIC19.16■□□□□ 0.66
USP20Q9Y2K6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.16■□□□□ 0.66
USP20Q9Y2K6 AC120114.3-201ENST00000611923 658 ntBASIC19.16■□□□□ 0.66
USP20Q9Y2K6 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP20Q9Y2K6 AP002414.3-201ENST00000589352 1468 ntBASIC19.16■□□□□ 0.66
USP20Q9Y2K6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP20Q9Y2K6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms