Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 AL138688.1-201ENST00000624851 1594 ntBASIC16.52■□□□□ 0.24
RNF6Q9Y252 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 NUS1P1-201ENST00000446295 882 ntBASIC16.52■□□□□ 0.24
RNF6Q9Y252 UNC93B7-201ENST00000509439 705 ntBASIC16.52■□□□□ 0.24
RNF6Q9Y252 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.52■□□□□ 0.24
RNF6Q9Y252 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF6Q9Y252 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF6Q9Y252 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF6Q9Y252 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF6Q9Y252 AC034236.2-201ENST00000606662 1610 ntBASIC16.52■□□□□ 0.23
RNF6Q9Y252 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 RNF126P1-202ENST00000569893 925 ntBASIC16.51■□□□□ 0.23
RNF6Q9Y252 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 AC046158.3-201ENST00000624947 2558 ntBASIC16.51■□□□□ 0.23
RNF6Q9Y252 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF6Q9Y252 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF6Q9Y252 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 KRT8P7-201ENST00000533003 1432 ntBASIC16.5■□□□□ 0.23
RNF6Q9Y252 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF6Q9Y252 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF6Q9Y252 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF6Q9Y252 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 AC009102.3-201ENST00000623118 1491 ntBASIC16.49■□□□□ 0.23
RNF6Q9Y252 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF6Q9Y252 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms