Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 OSM-203ENST00000403463 464 ntTSL 3 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 AC099336.1-201ENST00000417053 1171 ntBASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 GPAA1P2-201ENST00000417923 928 ntBASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 CD81-207ENST00000481687 890 ntTSL 2 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RIMBP3Q9UFD9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RIMBP3Q9UFD9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 AC005229.1-201ENST00000392885 409 ntBASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 DOC2GP-202ENST00000514950 1163 ntBASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC27.35■■□□□ 1.97
RIMBP3Q9UFD9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 BANF1P1-201ENST00000553684 263 ntBASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC27.34■■□□□ 1.97
RIMBP3Q9UFD9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 AC005082.1-201ENST00000413042 2259 ntBASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 C2orf69P2-201ENST00000562032 1123 ntBASIC27.33■■□□□ 1.97
RIMBP3Q9UFD9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 U62317.3-201ENST00000608319 855 ntBASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIMBP3Q9UFD9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 GMCL1P1-201ENST00000463439 1581 ntBASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RIMBP3Q9UFD9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 AC098850.1-201ENST00000419919 790 ntBASIC27.3■■□□□ 1.96
RIMBP3Q9UFD9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms