Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.83□□□□□ -0.04
CLN8Q9UBY8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 TP73-AS1-210ENST00000637775 1455 ntBASIC14.82□□□□□ -0.04
CLN8Q9UBY8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 AL591684.3-201ENST00000605187 298 ntBASIC14.82□□□□□ -0.04
CLN8Q9UBY8 AC116407.2-201ENST00000613639 860 ntBASIC14.82□□□□□ -0.04
CLN8Q9UBY8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLN8Q9UBY8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 AC006116.8-202ENST00000587620 1550 ntBASIC14.81□□□□□ -0.04
CLN8Q9UBY8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 AC012317.2-201ENST00000623305 2251 ntBASIC14.81□□□□□ -0.04
CLN8Q9UBY8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 RN7SL510P-201ENST00000581311 263 ntBASIC14.81□□□□□ -0.04
CLN8Q9UBY8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 AC100803.2-201ENST00000562459 1963 ntBASIC14.81□□□□□ -0.04
CLN8Q9UBY8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLN8Q9UBY8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CLN8Q9UBY8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLN8Q9UBY8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms