Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.36■□□□□ 0.53
CHD7Q9P2D1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.35■□□□□ 0.53
CHD7Q9P2D1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 AL671277.1-201ENST00000429656 993 ntBASIC18.34■□□□□ 0.53
CHD7Q9P2D1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 AC087163.2-201ENST00000457299 853 ntBASIC18.34■□□□□ 0.53
CHD7Q9P2D1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 AC069120.2-201ENST00000524091 540 ntBASIC18.34■□□□□ 0.53
CHD7Q9P2D1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD7Q9P2D1 AKAP8P1-201ENST00000434743 1349 ntBASIC18.34■□□□□ 0.53
CHD7Q9P2D1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 TSSK5P-201ENST00000423978 907 ntBASIC18.33■□□□□ 0.53
CHD7Q9P2D1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 AC116407.2-201ENST00000613639 860 ntBASIC18.33■□□□□ 0.53
CHD7Q9P2D1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 AC093677.2-201ENST00000600169 1863 ntBASIC18.33■□□□□ 0.53
CHD7Q9P2D1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHD7Q9P2D1 RBPMS2P1-201ENST00000437762 623 ntBASIC18.33■□□□□ 0.52
CHD7Q9P2D1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 AC026150.2-201ENST00000564693 1156 ntBASIC18.33■□□□□ 0.52
CHD7Q9P2D1 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 AC129492.6-201ENST00000611383 1305 ntBASIC18.33■□□□□ 0.52
CHD7Q9P2D1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.33■□□□□ 0.52
CHD7Q9P2D1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 STK19B-204ENST00000512515 211 ntBASIC18.32■□□□□ 0.52
CHD7Q9P2D1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHD7Q9P2D1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms