Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 RCN1P2-201ENST00000398357 915 ntBASIC18.07■□□□□ 0.48
VPS45Q9NRW7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 MIR3687-2-201ENST00000577708 61 ntBASIC18.07■□□□□ 0.48
VPS45Q9NRW7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 AP001160.2-201ENST00000596071 487 ntBASIC18.07■□□□□ 0.48
VPS45Q9NRW7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 MIR3687-1-201ENST00000614492 61 ntBASIC18.07■□□□□ 0.48
VPS45Q9NRW7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 AC009949.1-201ENST00000623048 1830 ntBASIC18.07■□□□□ 0.48
VPS45Q9NRW7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS45Q9NRW7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 IGHV3-22-201ENST00000520721 359 ntBASIC18.06■□□□□ 0.48
VPS45Q9NRW7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 AL356488.2-201ENST00000602755 427 ntBASIC18.06■□□□□ 0.48
VPS45Q9NRW7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VPS45Q9NRW7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 AC097374.2-201ENST00000618617 1306 ntBASIC18.05■□□□□ 0.48
VPS45Q9NRW7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 RPSAP43-201ENST00000402237 625 ntBASIC18.05■□□□□ 0.48
VPS45Q9NRW7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 AC027796.2-201ENST00000575326 344 ntBASIC18.05■□□□□ 0.48
VPS45Q9NRW7 AC010327.4-202ENST00000591484 748 ntBASIC18.05■□□□□ 0.48
VPS45Q9NRW7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VPS45Q9NRW7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS45Q9NRW7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS45Q9NRW7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VPS45Q9NRW7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS45Q9NRW7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS45Q9NRW7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VPS45Q9NRW7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms