Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 PCDHB18P-201ENST00000524813 2368 ntBASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 STK25P1-201ENST00000585406 838 ntBASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRDM9Q9NQV7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 AP005117.1-201ENST00000584346 1413 ntBASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 AF238378.1-201ENST00000526806 358 ntBASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 AC109462.3-201ENST00000573934 613 ntBASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 AC008608.2-201ENST00000606089 416 ntBASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 AP000867.4-201ENST00000641616 219 ntBASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.53■□□□□ 0.24
PRDM9Q9NQV7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 LYSMD4-203ENST00000378904 2122 ntBASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 AC003669.1-201ENST00000334569 611 ntBASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRDM9Q9NQV7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms